Mass Spectrometry Software

Intuitive, application-specific Thermo Scientific MS software accelerates the acquisition of high-quality mass spectral data and helps turn that data into answers to the most challenging scientific questions. 

Compound Discoverer Software


Save time and achieve more confident small-molecule identification with Thermo Scientific™ Compound Discoverer™ software.

Dionex™ DCMSLink™ Software Plug-In

Catalog #: Multiple catalog numbers exist

Use common MS software to control and acquire data from Thermo Scientific™ Dionex™ IC or LC system with the Thermo Scientific™ Dionex™ DCMSLink™ software plug-in.

ExactFinder Software


Take advantage of high-resolution, accurate-mass MS data to achieve more confident targeted or unknown screening with Thermo Scientific™ ExactFinder™ software.

High-Resolution Accurate-Mass MS/MS Spectral Libraries

Catalog #: Multiple catalog numbers exist

Harness the power of high-resolution accurate-mass MS/MS spectraI libraries to quickly and confidently identify drugs, toxins, and contaminants.

ImageQuest Software

Catalog #: 10137985

Detect, identify and determine the distribution of compounds — all in a single analysis.

iRC PRO Software


Calculate target analyte concentrations from SRM data faster and more accurately with iRC PRO ion ratio calculation software.

LipidSearch™ Software


Accurately and automatically identify and quantify cellular lipid molecular species from mass spectrometric data with Thermo Scientific™ LipidSearch™ software.

Mass Frontier Spectral Interpretation Software


Transform mass spectral data into answers, quickly and easily using Thermo Scientific™ Mass Frontier spectral interpretation software.

MetQuest™ Automated Quan/Qual Metabolic Screening Software


Perform quantitative metabolic stability studies and identify putative metabolites with a single injection using Thermo Scientific™ MetQuest™ software.

MetWorks™ Automated Metabolite Identification Software


Study metabolic stability, find biotransformations, and identify metabolite structures easily and confidently with Thermo Scientific™ MetWorks™ software.

MSQ™ Xcalibur™ Software Additional-License Upgrade

Catalog #: 069337

Upgrade to four licenses to acquire and reprocess data from the Thermo Scientific™ MSQ™ single quadrupole LC-MS.

PEAKS Studio Software

Catalog #: PEAKS40

Perform de novo sequencing, protein identification, assisted manual sequencing, and data manipulation quickly and efficiently using PEAKS Studio software.

PepFinder™ Software


Achieve accurate identification, in-depth characterization, and relative quantitation of protein therapeutics with Thermo Scientific™ PepFinder™ software.

Pinpoint™ Software


Leverage previously acquired proteomics discovery data to simplify the development of targeted quantitative assays with Thermo Scientific™ Pinpoint™ software.

ProMass Deconvolution™ Software

Catalog #: OPTON20885

Produce artifact-free deconvoluted ESI mass spectra of proteins and other biomolecules from MS data using Thermo Scientific™ ProMass Deconvolution™ software.